MLST(Multi-Locus Sequence Typing)是一种基于核酸序列的细菌分型技术,主要用于微生物种群中菌株的分型鉴定。MLST通过细菌内保守但具有足够多态性的基因座(loci)(通常是6到10个)的核苷酸序列来区分不同的菌株。本工具用于批量进行基因组的MLST分型,小工具会自动匹配物种分类。将需要分型的基因组文件保存到同一个文件夹中,将其压缩为zip格式进行提交。
示例文件:
将需要分型的基因组文件保存到同一个文件夹中,将其压缩为zip格式进行提交。

小工具结果:

支持的物种类型:
| aactinomycetemcomitans | hinfluenzae | ppentosaceus |
| abaumannii | hparasuis | pputida |
| achromobacter | hsuis | psalmonis |
| aeromonas | kaerogenes | ranatipestifer |
| aphagocytophilum | kingella | rhodococcus |
| arcobacter | klebsiella | sagalactiae |
| bbacilliformis | koxytoca | saureus |
| bcc | leptospira | sbsec |
| bcereus | liberibacter | scanis |
| bfragilis | listeria | schromogenes |
| bhenselae | llactis_phage | sdysgalactiae |
| blicheniformis | lsalivarius | senterica_achtman |
| bordetella | mabscessus | sepidermidis |
| borrelia | magalactiae | sgallolyticus |
| bpseudomallei | manserisalpingitidis | shaemolyticus |
| brachyspira | mbovis | shewanella |
| brucella | mcanis | shominis |
| bsubtilis | mcaseolyticus | sinorhizobium |
| bwashoensis | mcatarrhalis_achtman | smaltophilia |
| campylobacter | mflocculare | spneumoniae |
| campylobacter_nonjejuni | mgallisepticum | spseudintermedius |
| cbotulinum | mhaemolytica | spyogenes |
| cdifficile | mhominis | ssuis |
| cfreundii | mhyopneumoniae | staphlugdunensis |
| chlamydiales | mhyorhinis | sthermophilus |
| cmaltaromaticum | miowae | streptomyces |
| cperfringens | mplutonius | streptothermophilus |
| cronobacter | mpneumoniae | suberis |
| csepticum | msciuri | szooepidemicus |
| diphtheria | msynoviae | taylorella |
| dnodosus | mycobacteria | tenacibaculum |
| ecloacae | neisseria | tpallidum |
| ecoli | oralstrep | ureaplasma |
| ecoli_achtman | orhinotracheale | vcholerae |
| edwardsiella | otsutsugamushi | vibrio |
| efaecalis | pacnes | vparahaemolyticus |
| efaecium | paeruginosa | vtapetis |
| fpsychrophilum | pdamselae | vvulnificus |
| gallibacterium | pfluorescens | wolbachia |
| geotrichum | pgingivalis | xfastidiosa |
| hcinaedi | plarvae | ypseudotuberculosis_achtman |
| helicobacter | pmultocida | yruckeri |
当前版本为1.0版本,上架时间为:2025-05-27