MLST(Multi-Locus Sequence Typing)是一种基于核酸序列的细菌分型技术,主要用于微生物种群中菌株的分型鉴定。MLST通过细菌内保守但具有足够多态性的基因座(loci)(通常是6到10个)的核苷酸序列来区分不同的菌株。本工具用于批量进行基因组的MLST分型,小工具会自动匹配物种分类。将需要分型的基因组文件保存到同一个文件夹中,将其压缩为zip格式进行提交。
示例文件:
将需要分型的基因组文件保存到同一个文件夹中,将其压缩为zip格式进行提交。

小工具结果:

支持的物种类型:
| aactinomycetemcomitans | hinfluenzae | ppentosaceus | 
| abaumannii | hparasuis | pputida | 
| achromobacter | hsuis | psalmonis | 
| aeromonas | kaerogenes | ranatipestifer | 
| aphagocytophilum | kingella | rhodococcus | 
| arcobacter | klebsiella | sagalactiae | 
| bbacilliformis | koxytoca | saureus | 
| bcc | leptospira | sbsec | 
| bcereus | liberibacter | scanis | 
| bfragilis | listeria | schromogenes | 
| bhenselae | llactis_phage | sdysgalactiae | 
| blicheniformis | lsalivarius | senterica_achtman | 
| bordetella | mabscessus | sepidermidis | 
| borrelia | magalactiae | sgallolyticus | 
| bpseudomallei | manserisalpingitidis | shaemolyticus | 
| brachyspira | mbovis | shewanella | 
| brucella | mcanis | shominis | 
| bsubtilis | mcaseolyticus | sinorhizobium | 
| bwashoensis | mcatarrhalis_achtman | smaltophilia | 
| campylobacter | mflocculare | spneumoniae | 
| campylobacter_nonjejuni | mgallisepticum | spseudintermedius | 
| cbotulinum | mhaemolytica | spyogenes | 
| cdifficile | mhominis | ssuis | 
| cfreundii | mhyopneumoniae | staphlugdunensis | 
| chlamydiales | mhyorhinis | sthermophilus | 
| cmaltaromaticum | miowae | streptomyces | 
| cperfringens | mplutonius | streptothermophilus | 
| cronobacter | mpneumoniae | suberis | 
| csepticum | msciuri | szooepidemicus | 
| diphtheria | msynoviae | taylorella | 
| dnodosus | mycobacteria | tenacibaculum | 
| ecloacae | neisseria | tpallidum | 
| ecoli | oralstrep | ureaplasma | 
| ecoli_achtman | orhinotracheale | vcholerae | 
| edwardsiella | otsutsugamushi | vibrio | 
| efaecalis | pacnes | vparahaemolyticus | 
| efaecium | paeruginosa | vtapetis | 
| fpsychrophilum | pdamselae | vvulnificus | 
| gallibacterium | pfluorescens | wolbachia | 
| geotrichum | pgingivalis | xfastidiosa | 
| hcinaedi | plarvae | ypseudotuberculosis_achtman | 
| helicobacter | pmultocida | yruckeri | 
当前版本为1.0版本,上架时间为:2025-05-27